Gene detail information of Glyur003078s00038171.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G16670.11.00E-26Protein kinase superfamily protein
NRKEH42246.11.53E-78Serine/Threonine kinase stpk-V protein [Medicago truncatula]
Swissprottr|P85193|PK01_HELAN3.00E-27Putative serine/threonine-protein kinase {ECO:0000250|UniProtKB:Q9FE20, ECO:0000303|Ref.2} (Fragment)
trEMBLtr|A0A072VKU5|A0A072VKU5_MEDTR6.00E-79Serine/Threonine kinase stpk-V protein {ECO:0000313|EMBL:KEH42246.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold030781520918043+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004713  protein tyrosine kinase activity

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003078s00038171.1PF07714.12Pkinase_Tyr571166.60E-08
Glyur003078s00038171.1PF07714.12Pkinase_Tyr1192174.30E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.435
SRR1783600control1.385
SRR1783602moderate drought stress2.752
SRR1811619moderate drought stress2.378

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.957
DRR006520Root Summer glycyrrhizin high producing strain8.455
DRR006521Root Winter glycyrrhizin high producing strain0.643
DRR006522Root Winter glycyrrhizin high producing strain0.427
DRR006523Root Summer glycyrrhizin low producing strain19.324
DRR006524Root Summer glycyrrhizin low producing strain18.464
DRR006525Leaf Summer glycyrrhizin high producing strain1.035
DRR006526Leaf Summer glycyrrhizin high producing strain1.054

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.761
SRR2868004Drought Stress(Tissue:root)12.708
SRR2967015Control (Tissue:root)10.134

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.524
SRR9715740Leave3.369
SRR9715741Leave8.093
SRR9715739Root6.003
SRR9715742Root8.312
SRR9715743Root8.104

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h46.566
SRR8749028MeJA induced 9h84.133
SRR8749029MeJA induced 9h94.602
SRR8749030Uninduced168.498
SRR8749031Uninduced122.143
SRR8749032Uninduced109.661

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.473
SRR8400027Control-Root9.729

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved