Gene detail information of Glyur003088s00036697.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55550.10Concanavalin A-like lectin protein kinase family protein
NRXP_003537463.20PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max]
COGYP_003640725.13.00E-22serine/threonine protein kinase [Thermincola potens JR]
Swissprottr|Q9M2S4|LRKS4_ARATH0L-type lectin-domain containing receptor kinase S.4 (Precursor)
trEMBLtr|I1LMH1|I1LMH1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G34210.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold030881964621736+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003088s00036697.1PF00139.14Lectin_legB262779.20E-76
Glyur003088s00036697.1PF00069.20Pkinase3615695.20E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.954
SRR1783600control0.911
SRR1783602moderate drought stress1.226
SRR1811619moderate drought stress1.221

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.725
DRR006520Root Summer glycyrrhizin high producing strain12.635
DRR006521Root Winter glycyrrhizin high producing strain0.107
DRR006522Root Winter glycyrrhizin high producing strain0.104
DRR006523Root Summer glycyrrhizin low producing strain7.780
DRR006524Root Summer glycyrrhizin low producing strain8.001
DRR006525Leaf Summer glycyrrhizin high producing strain26.933
DRR006526Leaf Summer glycyrrhizin high producing strain26.731

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.506
SRR2868004Drought Stress(Tissue:root)10.571
SRR2967015Control (Tissue:root)9.548

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave125.182
SRR9715740Leave132.766
SRR9715741Leave172.403
SRR9715739Root8.400
SRR9715742Root23.276
SRR9715743Root19.020

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.442
SRR8749028MeJA induced 9h0.543
SRR8749029MeJA induced 9h0.298
SRR8749030Uninduced0.439
SRR8749031Uninduced0.073
SRR8749032Uninduced0.082

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.580
SRR8400027Control-Root12.747

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved