Gene detail information of Glyur003091s00037484.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G45580.1 | 3.00E-61 | Homeodomain-like superfamily protein |
| NR | AES95614.2 | 9.48E-153 | myb-like transcription factor family protein [Medicago truncatula] |
| Swissprot | tr|Q9SAK5|APL_ARATH | 6.00E-51 | Myb family transcription factor APL |
| trEMBL | tr|G7K874|G7K874_MEDTR | 4.00E-153 | Myb-like transcription factor family protein {ECO:0000313|EMBL:AES95614.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03091 | 2109 | 6211 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003091s00037484.1 | PF00249.26 | Myb_DNA-binding | 28 | 79 | 1.10E-18 |
| Glyur003091s00037484.1 | PF14379.1 | Myb_CC_LHEQLE | 123 | 171 | 3.20E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.961 |
| SRR1783600 | control | 7.796 |
| SRR1783602 | moderate drought stress | 3.466 |
| SRR1811619 | moderate drought stress | 3.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.947 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.120 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.699 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.100 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.344 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.140 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.950 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.465 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.408 |
| SRR2967015 | Control (Tissue:root) | 9.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.625 |
| SRR9715740 | Leave | 0.045 |
| SRR9715741 | Leave | 0.046 |
| SRR9715739 | Root | 1.568 |
| SRR9715742 | Root | 2.717 |
| SRR9715743 | Root | 3.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.381 |
| SRR8749028 | MeJA induced 9h | 25.364 |
| SRR8749029 | MeJA induced 9h | 15.172 |
| SRR8749030 | Uninduced | 6.960 |
| SRR8749031 | Uninduced | 3.574 |
| SRR8749032 | Uninduced | 1.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 29.045 |
| SRR8400027 | Control-Root | 34.850 |