Gene detail information of Glyur003107s00034856.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45560.14.00E-50cytochrome P450, family 76, subfamily C, polypeptide 1
NRP93149.25.30E-144RecName: Full=Licodione synthase; AltName: Full=(2S)-flavanone 2-hydroxylase; AltName: Full=CYP GE-5; AltName: Full=Cytochrome P450 93B1; AltName: Full=Flavone synthase II [Glycyrrhiza echinata]
COGYP_003950164.12.00E-27cytochrome p450 [Stigmatella aurantiaca DW4/3-1]
Swissprottr|P93149|C93B1_GLYEC2.00E-146Licodione synthase
trEMBLtr|Q9MBE8|Q9MBE8_GLYEC2.00E-141Cytochrome P450 {ECO:0000313|EMBL:BAA74466.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold031071687020+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP76C1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003107s00034856.1PF00067.17p450101861.40E-59
Glyur003107s00034856.1PF00067.17p4502243692.00E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control51.093
SRR1783600control49.921
SRR1783602moderate drought stress32.356
SRR1811619moderate drought stress32.262

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.278
DRR006520Root Summer glycyrrhizin high producing strain6.132
DRR006521Root Winter glycyrrhizin high producing strain0.177
DRR006522Root Winter glycyrrhizin high producing strain0.173
DRR006523Root Summer glycyrrhizin low producing strain3.568
DRR006524Root Summer glycyrrhizin low producing strain3.588
DRR006525Leaf Summer glycyrrhizin high producing strain0.680
DRR006526Leaf Summer glycyrrhizin high producing strain0.713

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)65.556
SRR2868004Drought Stress(Tissue:root)202.811
SRR2967015Control (Tissue:root)163.285

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.272
SRR9715740Leave0.519
SRR9715741Leave1.618
SRR9715739Root78.725
SRR9715742Root38.038
SRR9715743Root49.400

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.552
SRR8749028MeJA induced 9h8.445
SRR8749029MeJA induced 9h4.528
SRR8749030Uninduced125.627
SRR8749031Uninduced222.263
SRR8749032Uninduced67.180

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root174.423
SRR8400027Control-Root157.579

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved