Gene detail

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Gene detail information of Glyur003156s00037681.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G78270.1	7.00E-14	UDP-glucosyl transferase 85A4
NR	XP_006605461.1	4.34E-72	PREDICTED: light-inducible protein CPRF2-like isoform X1 [Glycine max]
Swissprot	tr\|P42774\|GBF1_ARATH	6.00E-21	G-box-binding factor 1
trEMBL	tr\|I1ND16\|I1ND16_SOYBN	2.00E-72	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G01030.1}

Sequence

Transcript Sequence

>Glyur003156s00037681.1
ATGTTCTATTGGTTCCATCTTATTTCGAAAACAAATCGTGAAGCTACTGAGTTCACAAGTTTCTTGAGCTTGATGGAGACAGGAGAATCCAATAAGTTTGGCAAATTCATGGTGCCTCAAGATGAATCTCTAAGCAGACCTTTGCTACCACATTGGACTACTTCTATGCAGGCATATTACAATTCTGGGTCTACTCCAACTCCATTTTTAAATCCACATGCAGCTGGTCCTTACTTTTATCCCTACATGTGGCCAAATCAGACAAACAACCCATTGCTTCAATGTGATGCTCAACATGACCCTGGGAAGCTCTCCAATAAACCCCAGGATGCTGCATTGGCTTTTTCGGAAATAGTACACAGGACTTTTGGTGAACAAAACTTGGATTTGAAGAAAGGATCTGATAGAAACTTACAACATGAAAGTTTAGTAATTAAGGGATCAAGAGAAAATGGAAGCAGATCTTCACTACTGAAAAACAACAGTGATGGAATGTCCCGGAGTGCGGCGAGTGGAAGCAAGGGATCACCAGATGAAGGCCATGACACTAACAATGATTTTCCTTCAACTAGGAAGCAACAATCTAATATGATGCTTGAAAATGAAAATTCAACTGAATTGACTCAGAATTTGGAGACAGGCCTCAAGGCATCTAGCTCTAATGTTCAACCAATAAAGATGCAAAGAAAGCCACATGCTGTGTTGAATCGATGTCCAATATTTCAAGGCCATATCAATCCATTGTTCAAACTAGCAAAGTTGCGTCAACTTAGAGGCTTTCACATGACCTTTGTCCACACTAAGTACAACCTCAAACGCTTGCTCAAATCAAGGGGTCCCGATGCCCTTAATGGTCGTCTAACCCCCATGGATAGTGATGGTGATGGCTTCTCACCTATTCAGCAGCTTGAAGAGGAAGAGGATGAAATAAGAAAAGAAAGAAAAAGACAGTCAAACAGGGAATCCGCTAAGAGATCAAGGATACGGAAACAGCAAGAGTGTGAAGAGCTACGTAGAAACATAGACAGTATTAAGGATGAGAACTCCTCACTAGCACAAATGCTCAAAAGGCTTTCTGAGGAATGTCTGGAGCTCAGCAATGAGAATGATTCCCTTCAGGAAGAGCTGGTTGAGATGTATGGACCAGAATCAATTGCAGATCTATTGCCCATGAAGCCTGCCTGACACTGTTGCTGGCTGACTCCCAAAAAAACAGTTAGAAGATAAGGAAGAGCATCTCACAACTGATTGGAGTCTAAAATTTTATTTTATTTTTTAT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold03156	20831	27697	-

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006351 transcription, DNA-templated

GO:0006355 regulation of transcription, DNA-templated

cellular_component GO:0005634 nucleus molecular_function GO:0003677 DNA binding GO:0003700 transcription factor activity, sequence-specific DNA binding GO:0043565 sequence-specific DNA binding "

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003156s00037681.1	PF07777.6	MFMR	43	87	4.10E-06
Glyur003156s00037681.1	PF00170.16	bZIP_1	307	369	7.00E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.363
SRR1783600	control	0.332
SRR1783602	moderate drought stress	0.109
SRR1811619	moderate drought stress	0.117

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.335
DRR006520	Root Summer glycyrrhizin high producing strain	1.283
DRR006521	Root Winter glycyrrhizin high producing strain	0.736
DRR006522	Root Winter glycyrrhizin high producing strain	0.908
DRR006523	Root Summer glycyrrhizin low producing strain	1.193
DRR006524	Root Summer glycyrrhizin low producing strain	1.118
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.821
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.789

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.945
SRR2868004	Drought Stress(Tissue:root)	0.467
SRR2967015	Control (Tissue:root)	0.356

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.541
SRR9715740	Leave	1.086
SRR9715741	Leave	0.541
SRR9715739	Root	0.000
SRR9715742	Root	0.010
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.752
SRR8749028	MeJA induced 9h	2.079
SRR8749029	MeJA induced 9h	2.104
SRR8749030	Uninduced	1.024
SRR8749031	Uninduced	1.153
SRR8749032	Uninduced	0.367

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.789
SRR8400027	Control-Root	0.518