Gene detail information of Glyur003169s00037739.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10390.10Flavin containing amine oxidoreductase family protein
NRXP_004504519.10PREDICTED: lysine-specific histone demethylase 1 homolog 3-like isoform X1 [Cicer arietinum]
COGYP_001544095.12.00E-64amine oxidase [Herpetosiphon aurantiacus DSM 785]
Swissprottr|Q9CAE3|FLD_ARATH0Protein FLOWERING LOCUS D
trEMBLtr|V7BKH0|V7BKH0_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17528.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold031692371127503-


Gene family

Gene familysubfamily
Transcription Factors FamilySWI/SNF-SWI3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003677  DNA binding

GO:0005515  protein binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003169s00037739.1PF04433.12SWIRM1332176.80E-15
Glyur003169s00037739.1PF01593.19Amino_oxidase2436691.50E-100


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.304
SRR1783600control6.468
SRR1783602moderate drought stress8.535
SRR1811619moderate drought stress8.490

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.169
DRR006520Root Summer glycyrrhizin high producing strain6.540
DRR006521Root Winter glycyrrhizin high producing strain5.650
DRR006522Root Winter glycyrrhizin high producing strain5.324
DRR006523Root Summer glycyrrhizin low producing strain7.040
DRR006524Root Summer glycyrrhizin low producing strain6.552
DRR006525Leaf Summer glycyrrhizin high producing strain4.739
DRR006526Leaf Summer glycyrrhizin high producing strain4.602

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.262
SRR2868004Drought Stress(Tissue:root)10.953
SRR2967015Control (Tissue:root)10.950

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.802
SRR9715740Leave5.864
SRR9715741Leave5.680
SRR9715739Root1.941
SRR9715742Root7.098
SRR9715743Root6.084

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.058
SRR8749028MeJA induced 9h9.092
SRR8749029MeJA induced 9h5.663
SRR8749030Uninduced5.324
SRR8749031Uninduced4.126
SRR8749032Uninduced3.484

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.700
SRR8400027Control-Root8.802

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved