Gene detail information of Glyur003175s00040131.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16520.3 | 6.00E-97 | UDP-glucosyl transferase 88A1 |
| NR | XP_003533971.1 | 3.91E-166 | PREDICTED: UDP-glycosyltransferase 88A1-like [Glycine max] |
| Swissprot | tr|Q9LK73|U88A1_ARATH | 7.00E-116 | UDP-glycosyltransferase 88A1 |
| trEMBL | tr|I1L2Z1|I1L2Z1_SOYBN | 1.00E-166 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G23750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03175 | 1999 | 4250 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003175s00040131.1 | PF00201.13 | UDPGT | 301 | 385 | 1.10E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.489 |
| SRR1783600 | control | 0.574 |
| SRR1783602 | moderate drought stress | 0.213 |
| SRR1811619 | moderate drought stress | 0.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.041 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.081 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 43.795 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.110 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.166 |
| SRR2967015 | Control (Tissue:root) | 0.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.293 |
| SRR9715740 | Leave | 5.325 |
| SRR9715741 | Leave | 2.757 |
| SRR9715739 | Root | 0.130 |
| SRR9715742 | Root | 0.399 |
| SRR9715743 | Root | 0.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.589 |
| SRR8400027 | Control-Root | 0.897 |