Gene detail information of Glyur003192s00037961.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G53620.11.00E-109pyrophosphorylase 4
NRKEH42358.11.47E-163soluble inorganic pyrophosphatase [Medicago truncatula]
COGYP_679690.11.00E-68inorganic pyrophosphatase [Cytophaga hutchinsonii ATCC 33406]
Swissprottr|O48556|IPYR_MAIZE2.00E-124Soluble inorganic pyrophosphatase
trEMBLtr|A0A072VLU8|A0A072VLU8_MEDTR5.00E-164Soluble inorganic pyrophosphatase {ECO:0000313|EMBL:KEH42358.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0319248879363+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01507ppa EC:3.6.1.1 Oxidative phosphorylation map00190


Gene Ontology

biological_process

GO:0006796  phosphate-containing compound metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0000287  magnesium ion binding

GO:0004427  inorganic diphosphatase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003192s00037961.1PF00719.14Pyrophosphatase1943474.50E-57


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control120.001
SRR1783600control120.118
SRR1783602moderate drought stress60.933
SRR1811619moderate drought stress60.709

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain186.082
DRR006520Root Summer glycyrrhizin high producing strain186.206
DRR006521Root Winter glycyrrhizin high producing strain235.220
DRR006522Root Winter glycyrrhizin high producing strain229.391
DRR006523Root Summer glycyrrhizin low producing strain372.530
DRR006524Root Summer glycyrrhizin low producing strain372.473
DRR006525Leaf Summer glycyrrhizin high producing strain118.960
DRR006526Leaf Summer glycyrrhizin high producing strain118.374

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)149.406
SRR2868004Drought Stress(Tissue:root)129.083
SRR2967015Control (Tissue:root)139.788

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave91.673
SRR9715740Leave92.349
SRR9715741Leave89.690
SRR9715739Root100.774
SRR9715742Root128.079
SRR9715743Root120.712

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h262.600
SRR8749028MeJA induced 9h200.205
SRR8749029MeJA induced 9h237.032
SRR8749030Uninduced244.504
SRR8749031Uninduced117.995
SRR8749032Uninduced85.692

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root145.629
SRR8400027Control-Root206.920

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved