Gene detail information of Glyur003194s00044695.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14130.14.00E-85Peroxidase superfamily protein
NRAFK39314.11.30E-144unknown [Lotus japonicus]
Swissprottr|Q96509|PER55_ARATH9.00E-105Peroxidase 55 (Precursor)
trEMBLtr|I3SGC2|I3SGC2_LOTJA5.00E-145Uncharacterized protein {ECO:0000313|EMBL:AFK39314.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold031942619527691-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003194s00044695.1PF00141.18peroxidase12142.00E-60


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.036
SRR1783600control29.797
SRR1783602moderate drought stress27.446
SRR1811619moderate drought stress26.628

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.369
DRR006520Root Summer glycyrrhizin high producing strain1.657
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain3.646
DRR006524Root Summer glycyrrhizin low producing strain2.979
DRR006525Leaf Summer glycyrrhizin high producing strain4.100
DRR006526Leaf Summer glycyrrhizin high producing strain4.798

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)77.036
SRR2868004Drought Stress(Tissue:root)71.010
SRR2967015Control (Tissue:root)63.374

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.627
SRR9715740Leave26.007
SRR9715741Leave68.101
SRR9715739Root48.096
SRR9715742Root68.947
SRR9715743Root68.200

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h36.246
SRR8749028MeJA induced 9h64.441
SRR8749029MeJA induced 9h77.189
SRR8749030Uninduced317.373
SRR8749031Uninduced94.483
SRR8749032Uninduced66.743

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root51.716
SRR8400027Control-Root67.212

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved