Gene detail information of Glyur003202s00043108.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G32180.12.00E-54pantothenate kinase 2
NRKHN19302.12.37E-70Pantothenate kinase 2 [Glycine soja]
Swissprottr|Q0J035|PANK2_ORYSJ2.00E-67Pantothenate kinase 2
trEMBLtr|B9RB16|B9RB16_RICCO1.00E-68Pantothenate kinase, putative {ECO:0000313|EMBL:EEF51993.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold032021320714587+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09680coaW EC:2.7.1.33 Pantothenate and CoA biosynthesis map00770


Gene Ontology

biological_process

GO:0015937  coenzyme A biosynthetic process


molecular_function

GO:0004594  pantothenate kinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003202s00043108.1PF03630.9Fumble11868.60E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.488
SRR1783600control0.261
SRR1783602moderate drought stress0.271
SRR1811619moderate drought stress0.130

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.385
DRR006520Root Summer glycyrrhizin high producing strain1.714
DRR006521Root Winter glycyrrhizin high producing strain1.054
DRR006522Root Winter glycyrrhizin high producing strain1.003
DRR006523Root Summer glycyrrhizin low producing strain1.062
DRR006524Root Summer glycyrrhizin low producing strain1.452
DRR006525Leaf Summer glycyrrhizin high producing strain0.490
DRR006526Leaf Summer glycyrrhizin high producing strain1.133

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.577
SRR2868004Drought Stress(Tissue:root)0.851
SRR2967015Control (Tissue:root)1.217

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.046
SRR9715740Leave0.486
SRR9715741Leave0.217
SRR9715739Root0.000
SRR9715742Root0.000
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.217
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.241
SRR8400027Control-Root0.234