Gene detail information of Glyur003209s00038005.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G22170.14.00E-121Phosphoglycerate mutase family protein
NRXP_007159719.10hypothetical protein PHAVU_002G261600g [Phaseolus vulgaris]
COGYP_004651499.11.00E-902,3-bisphosphoglycerate-independent phosphoglycerate mutase [Parachlamydia acanthamoebae UV-7]
trEMBLtr|V7CQU5|V7CQU5_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW31713.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold032091199717421+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01834PGAM, gpmA EC:5.4.2.11 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Glycine, serine and threonine metabolismmap00260
Glucagon signaling pathwaymap04922
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006096  glycolytic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004619  phosphoglycerate mutase activity

GO:0016868  intramolecular transferase activity, phosphotransferases


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003209s00038005.1PF00300.17His_Phos_11523367.30E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.164
SRR1783600control12.798
SRR1783602moderate drought stress13.106
SRR1811619moderate drought stress12.285

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.107
DRR006520Root Summer glycyrrhizin high producing strain11.866
DRR006521Root Winter glycyrrhizin high producing strain11.870
DRR006522Root Winter glycyrrhizin high producing strain11.049
DRR006523Root Summer glycyrrhizin low producing strain18.410
DRR006524Root Summer glycyrrhizin low producing strain18.099
DRR006525Leaf Summer glycyrrhizin high producing strain1.669
DRR006526Leaf Summer glycyrrhizin high producing strain1.426

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.630
SRR2868004Drought Stress(Tissue:root)19.698
SRR2967015Control (Tissue:root)16.751

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.432
SRR9715740Leave10.846
SRR9715741Leave24.464
SRR9715739Root3.495
SRR9715742Root12.038
SRR9715743Root9.746

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h36.500
SRR8749028MeJA induced 9h23.714
SRR8749029MeJA induced 9h30.240
SRR8749030Uninduced32.295
SRR8749031Uninduced31.841
SRR8749032Uninduced22.446

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.687
SRR8400027Control-Root20.032

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved