Gene detail information of Glyur003222s00038187.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT5G58730.1 | 2.00E-90 | pfkB-like carbohydrate kinase family protein |
NR | XP_004490595.1 | 0 | PREDICTED: uncharacterized protein LOC101500912 [Cicer arietinum] |
COG | YP_629034.1 | 2.00E-58 | PfkB family kinase [Myxococcus xanthus DK 1622] |
trEMBL | tr|I1MBA8|I1MBA8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G37260.1} |
Sequence
Transcript Sequence |
---|
Protein Sequence |
---|
Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold03222 | 15710 | 19281 | - |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K19517 | MIK | EC:2.7.1.64 | Inositol phosphate metabolism | map00562 |
Gene OntologyNot hits found. |
Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur003222s00038187.1 | PF00294.19 | PfkB | 174 | 275 | 5.50E-16 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 11.012 |
SRR1783600 | control | 11.210 |
SRR1783602 | moderate drought stress | 8.602 |
SRR1811619 | moderate drought stress | 8.214 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 14.992 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 14.319 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 18.856 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 18.522 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 21.459 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 21.351 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.102 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.932 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 16.905 |
SRR2868004 | Drought Stress(Tissue:root) | 14.908 |
SRR2967015 | Control (Tissue:root) | 17.018 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 27.494 |
SRR9715740 | Leave | 31.151 |
SRR9715741 | Leave | 30.251 |
SRR9715739 | Root | 26.908 |
SRR9715742 | Root | 23.655 |
SRR9715743 | Root | 21.607 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 21.141 |
SRR8749028 | MeJA induced 9h | 17.055 |
SRR8749029 | MeJA induced 9h | 16.431 |
SRR8749030 | Uninduced | 20.436 |
SRR8749031 | Uninduced | 21.500 |
SRR8749032 | Uninduced | 30.593 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 19.585 |
SRR8400027 | Control-Root | 18.383 |