Gene detail information of Glyur003252s00036289.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G29320.10Glycosyl transferase, family 35
NRXP_004489452.10PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Cicer arietinum]
COGNP_440871.10glycogen phosphorylase [Synechocystis sp. PCC 6803]
Swissprottr|P53536|PHSL_VICFA0Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic (Precursor)
trEMBLtr|I1LWR4|I1LWR4_SOYBN0Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold032521185822117+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT35


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00688PYG, glgP EC:2.4.1.1 Starch and sucrose metabolism map00500
Biofilm formation - Escherichia colimap02026
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004645  phosphorylase activity

GO:0008184  glycogen phosphorylase activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003252s00036289.1PF00343.15Phosphorylase1915039.80E-133
Glyur003252s00036289.1PF00343.15Phosphorylase5919901.50E-172


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control272.595
SRR1783600control266.486
SRR1783602moderate drought stress209.134
SRR1811619moderate drought stress207.450

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain198.521
DRR006520Root Summer glycyrrhizin high producing strain202.815
DRR006521Root Winter glycyrrhizin high producing strain33.451
DRR006522Root Winter glycyrrhizin high producing strain32.533
DRR006523Root Summer glycyrrhizin low producing strain161.526
DRR006524Root Summer glycyrrhizin low producing strain160.961
DRR006525Leaf Summer glycyrrhizin high producing strain19.563
DRR006526Leaf Summer glycyrrhizin high producing strain19.690

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.115
SRR2868004Drought Stress(Tissue:root)26.493
SRR2967015Control (Tissue:root)29.696

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.743
SRR9715740Leave6.640
SRR9715741Leave7.816
SRR9715739Root11.266
SRR9715742Root96.944
SRR9715743Root80.156

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.199
SRR8749028MeJA induced 9h17.636
SRR8749029MeJA induced 9h10.319
SRR8749030Uninduced3.813
SRR8749031Uninduced0.942
SRR8749032Uninduced2.534

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root273.313
SRR8400027Control-Root238.740

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved