Gene detail information of Glyur003255s00040876.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38220.13.00E-159Peptidase M20/M25/M40 family protein
NRXP_004498101.10PREDICTED: aminoacylase-1-like isoform X2 [Cicer arietinum]
COGYP_003836017.11.00E-26peptidase M20 [Micromonospora aurantiaca ATCC 27029]
trEMBLtr|G7IBI0|G7IBI0_MEDTR0Aminoacylase-1 {ECO:0000256|PIRNR:PIRNR036696}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold032551473520202+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14677ACY1 EC:3.5.1.14 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220


Gene Ontology

biological_process

GO:0006508  proteolysis

GO:0008152  metabolic process


molecular_function

GO:0008237  metallopeptidase activity

GO:0016787  hydrolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003255s00040876.1PF01546.23Peptidase_M201905001.20E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.673
SRR1783600control25.565
SRR1783602moderate drought stress37.873
SRR1811619moderate drought stress37.782

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain61.734
DRR006520Root Summer glycyrrhizin high producing strain62.146
DRR006521Root Winter glycyrrhizin high producing strain66.355
DRR006522Root Winter glycyrrhizin high producing strain64.756
DRR006523Root Summer glycyrrhizin low producing strain50.347
DRR006524Root Summer glycyrrhizin low producing strain51.015
DRR006525Leaf Summer glycyrrhizin high producing strain15.582
DRR006526Leaf Summer glycyrrhizin high producing strain15.683

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.294
SRR2868004Drought Stress(Tissue:root)37.155
SRR2967015Control (Tissue:root)36.603

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.368
SRR9715740Leave20.802
SRR9715741Leave20.425
SRR9715739Root24.319
SRR9715742Root35.039
SRR9715743Root30.053

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h27.215
SRR8749028MeJA induced 9h19.730
SRR8749029MeJA induced 9h20.787
SRR8749030Uninduced23.678
SRR8749031Uninduced13.514
SRR8749032Uninduced25.409

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.474
SRR8400027Control-Root56.308

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved