Gene detail information of Glyur003290s00039805.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65140.15.00E-104Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
NRXP_007141163.10hypothetical protein PHAVU_008G172400g [Phaseolus vulgaris]
COGYP_003951497.11.00E-45beta-phosphoglucomutase hydrolase [Stigmatella aurantiaca DW4/3-1]
Swissprottr|Q5HZ05|TPPJ_ARATH6.00E-127Probable trehalose-phosphate phosphatase J
trEMBLtr|V7B5J5|V7B5J5_PHAVU0Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0329031716305+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01087otsB EC:3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003290s00039805.1PF02358.11Trehalose_PPase1203473.40E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.731
SRR1783600control0.734
SRR1783602moderate drought stress0.831
SRR1811619moderate drought stress0.775

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.202
DRR006520Root Summer glycyrrhizin high producing strain10.269
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain24.015
DRR006524Root Summer glycyrrhizin low producing strain23.857
DRR006525Leaf Summer glycyrrhizin high producing strain1.617
DRR006526Leaf Summer glycyrrhizin high producing strain1.648

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.453
SRR2868004Drought Stress(Tissue:root)16.836
SRR2967015Control (Tissue:root)8.758

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.832
SRR9715740Leave3.403
SRR9715741Leave4.156
SRR9715739Root6.426
SRR9715742Root31.557
SRR9715743Root21.962

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.063
SRR8749028MeJA induced 9h9.305
SRR8749029MeJA induced 9h34.262
SRR8749030Uninduced17.581
SRR8749031Uninduced15.358
SRR8749032Uninduced33.319

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.266
SRR8400027Control-Root9.609

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved