Gene detail information of Glyur003292s00043210.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
NRXP_003545882.10PREDICTED: polyphenol oxidase A1, chloroplastic-like [Glycine max]
Swissprottr|Q06215|PPO_VICFA0Polyphenol oxidase A1, chloroplastic (Precursor)
trEMBLtr|I1MEE6|I1MEE6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G07710.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold032921725820429-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00422E1.10.3.1 EC:1.10.3.1 Tyrosine metabolism map00350
Isoquinoline alkaloid biosynthesismap00950


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0046148  pigment biosynthetic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004097  catechol oxidase activity

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003292s00043210.1PF00264.15Tyrosinase1883931.60E-35
Glyur003292s00043210.1PF12142.3PPO1_DWL4004538.50E-31
Glyur003292s00043210.1PF12143.3PPO1_KFDV4836105.80E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.597
SRR1783600control15.457
SRR1783602moderate drought stress7.285
SRR1811619moderate drought stress7.342

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.100
DRR006526Leaf Summer glycyrrhizin high producing strain0.100

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)71.929
SRR2868004Drought Stress(Tissue:root)189.645
SRR2967015Control (Tissue:root)230.585

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.729
SRR9715740Leave1.329
SRR9715741Leave15.894
SRR9715739Root13.600
SRR9715742Root16.939
SRR9715743Root13.912

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.681
SRR8749028MeJA induced 9h31.611
SRR8749029MeJA induced 9h5.960
SRR8749030Uninduced549.412
SRR8749031Uninduced525.223
SRR8749032Uninduced197.235

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root140.119
SRR8400027Control-Root89.719

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved