Gene detail information of Glyur003331s00041636.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G44820.11.00E-175Peptidase M20/M25/M40 family protein
NRXP_003543794.10PREDICTED: aminoacylase-1-like [Glycine max]
COGYP_002433592.13.00E-26peptidase M20 [Desulfatibacillum alkenivorans AK-01]
Swissprottr|Q9C5C4|ARGE_ARATH6.00E-08Acetylornithine deacetylase
trEMBLtr|I1LW56|I1LW56_SOYBN0Aminoacylase-1 {ECO:0000256|PIRNR:PIRNR036696}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold03331239918860+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14677ACY1 EC:3.5.1.14 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220


Gene Ontology

biological_process

GO:0006508  proteolysis

GO:0006520  cellular amino acid metabolic process

GO:0008152  metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0004046  aminoacylase activity

GO:0008237  metallopeptidase activity

GO:0016787  hydrolase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003331s00041636.2PF01546.23Peptidase_M201082631.80E-19
Glyur003331s00041636.2PF07687.9M20_dimer2273301.40E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control76.748
SRR1783600control76.746
SRR1783602moderate drought stress88.000
SRR1811619moderate drought stress87.466

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain57.744
DRR006520Root Summer glycyrrhizin high producing strain57.401
DRR006521Root Winter glycyrrhizin high producing strain55.906
DRR006522Root Winter glycyrrhizin high producing strain54.107
DRR006523Root Summer glycyrrhizin low producing strain81.387
DRR006524Root Summer glycyrrhizin low producing strain81.163
DRR006525Leaf Summer glycyrrhizin high producing strain40.987
DRR006526Leaf Summer glycyrrhizin high producing strain40.446

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)57.878
SRR2868004Drought Stress(Tissue:root)60.199
SRR2967015Control (Tissue:root)58.195

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.969
SRR9715740Leave29.232
SRR9715741Leave30.919
SRR9715739Root42.310
SRR9715742Root49.985
SRR9715743Root49.098

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h77.710
SRR8749028MeJA induced 9h39.493
SRR8749029MeJA induced 9h64.751
SRR8749030Uninduced25.435
SRR8749031Uninduced23.500
SRR8749032Uninduced35.520

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.729
SRR8400027Control-Root38.649

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved