Gene detail information of Glyur003355s00039234.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G54030.15.00E-178Protein kinase protein with tetratricopeptide repeat domain
NRXP_010101852.10putative serine/threonine-protein kinase [Morus notabilis]
Swissprottr|Q9FHD7|Y5126_ARATH2.00E-178Probable serine/threonine-protein kinase At5g41260
trEMBLtr|W9RGI8|W9RGI8_9ROSA0Putative serine/threonine-protein kinase {ECO:0000313|EMBL:EXB89989.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold033551561821363+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.16.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14500BSK EC:2.7.11.1 Plant hormone signal transduction map04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003355s00039234.1PF07714.12Pkinase_Tyr721453.10E-06
Glyur003355s00039234.1PF07714.12Pkinase_Tyr1752897.80E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.779
SRR1783600control10.899
SRR1783602moderate drought stress8.274
SRR1811619moderate drought stress8.348

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.991
DRR006520Root Summer glycyrrhizin high producing strain19.328
DRR006521Root Winter glycyrrhizin high producing strain0.410
DRR006522Root Winter glycyrrhizin high producing strain0.358
DRR006523Root Summer glycyrrhizin low producing strain11.056
DRR006524Root Summer glycyrrhizin low producing strain10.417
DRR006525Leaf Summer glycyrrhizin high producing strain1.413
DRR006526Leaf Summer glycyrrhizin high producing strain1.408

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.936
SRR2868004Drought Stress(Tissue:root)30.791
SRR2967015Control (Tissue:root)37.788

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.055
SRR9715740Leave0.077
SRR9715741Leave0.451
SRR9715739Root14.466
SRR9715742Root15.986
SRR9715743Root16.751

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.096
SRR8749028MeJA induced 9h0.044
SRR8749029MeJA induced 9h0.063
SRR8749030Uninduced0.289
SRR8749031Uninduced0.138
SRR8749032Uninduced0.378

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root76.604
SRR8400027Control-Root92.679

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved