Gene detail information of Glyur003392s00033373.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09410.1 | 4.00E-138 | Pectinacetylesterase family protein |
| NR | XP_004492341.1 | 0 | PREDICTED: protein notum homolog isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7L4F5|G7L4F5_MEDTR | 0 | Pectinacetylesterase family protein {ECO:0000313|EMBL:AES79289.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03392 | 4375 | 11205 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | CE13 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K19882 | NOTUM | EC:3.1.1.98 | Wnt signaling pathway | map04310 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003392s00033373.3 | PF03283.8 | PAE | 111 | 436 | 9.70E-120 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.157 |
| SRR1783600 | control | 8.371 |
| SRR1783602 | moderate drought stress | 15.405 |
| SRR1811619 | moderate drought stress | 14.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.342 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.383 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.796 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.375 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.325 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.531 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.151 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 16.360 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.462 |
| SRR2967015 | Control (Tissue:root) | 17.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.988 |
| SRR9715740 | Leave | 9.396 |
| SRR9715741 | Leave | 9.519 |
| SRR9715739 | Root | 2.523 |
| SRR9715742 | Root | 5.790 |
| SRR9715743 | Root | 5.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.069 |
| SRR8749028 | MeJA induced 9h | 7.058 |
| SRR8749029 | MeJA induced 9h | 6.238 |
| SRR8749030 | Uninduced | 7.113 |
| SRR8749031 | Uninduced | 5.696 |
| SRR8749032 | Uninduced | 4.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 19.013 |
| SRR8400027 | Control-Root | 14.828 |