Gene detail information of Glyur003428s00039061.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G30270.10CBL-interacting protein kinase 23
NRXP_003533850.10PREDICTED: CBL-interacting serine/threonine-protein kinase 23 [Glycine max]
COGYP_823396.13.00E-34serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprottr|Q93VD3|CIPKN_ARATH0CBL-interacting serine/threonine-protein kinase 23
trEMBLtr|I1L269|I1L269_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G11770.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold03428506012219-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003428s00039061.1PF00069.20Pkinase232783.30E-75
Glyur003428s00039061.1PF03822.9NAF3223823.60E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control52.325
SRR1783600control51.629
SRR1783602moderate drought stress43.336
SRR1811619moderate drought stress43.378

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain87.545
DRR006520Root Summer glycyrrhizin high producing strain87.719
DRR006521Root Winter glycyrrhizin high producing strain110.097
DRR006522Root Winter glycyrrhizin high producing strain107.087
DRR006523Root Summer glycyrrhizin low producing strain139.547
DRR006524Root Summer glycyrrhizin low producing strain139.386
DRR006525Leaf Summer glycyrrhizin high producing strain25.356
DRR006526Leaf Summer glycyrrhizin high producing strain25.715

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)146.506
SRR2868004Drought Stress(Tissue:root)215.762
SRR2967015Control (Tissue:root)158.163

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave66.467
SRR9715740Leave67.540
SRR9715741Leave69.923
SRR9715739Root8.554
SRR9715742Root34.777
SRR9715743Root28.206

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h117.502
SRR8749028MeJA induced 9h170.244
SRR8749029MeJA induced 9h132.305
SRR8749030Uninduced239.442
SRR8749031Uninduced203.887
SRR8749032Uninduced188.154

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root113.836
SRR8400027Control-Root136.539

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved