Gene detail information of Glyur003440s00037457.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31950.11.00E-49cytochrome P450, family 82, subfamily C, polypeptide 3
NRKEH30996.12.15E-117cytochrome P450 family protein [Medicago truncatula]
COGYP_004303682.13.00E-26cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprottr|O49858|C82A3_SOYBN1.00E-77Cytochrome P450 82A3
trEMBLtr|A0A072UNP8|A0A072UNP8_MEDTR8.00E-118Cytochrome P450 family protein {ECO:0000313|EMBL:KEH30996.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold034402323723845-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP82C3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003440s00037457.1PF00067.17p45011801.40E-57


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.126
SRR1783600control1.153
SRR1783602moderate drought stress2.016
SRR1811619moderate drought stress2.060

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.521
DRR006520Root Summer glycyrrhizin high producing strain1.807
DRR006521Root Winter glycyrrhizin high producing strain100.921
DRR006522Root Winter glycyrrhizin high producing strain97.534
DRR006523Root Summer glycyrrhizin low producing strain12.777
DRR006524Root Summer glycyrrhizin low producing strain12.192
DRR006525Leaf Summer glycyrrhizin high producing strain1.409
DRR006526Leaf Summer glycyrrhizin high producing strain1.330

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.283
SRR2868004Drought Stress(Tissue:root)7.319
SRR2967015Control (Tissue:root)15.789

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.088
SRR9715740Leave9.567
SRR9715741Leave9.888
SRR9715739Root0.728
SRR9715742Root1.147
SRR9715743Root0.505

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h65.456
SRR8749028MeJA induced 9h94.847
SRR8749029MeJA induced 9h131.922
SRR8749030Uninduced196.159
SRR8749031Uninduced106.512
SRR8749032Uninduced162.869

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.719
SRR8400027Control-Root3.032

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved