Gene detail information of Glyur003456s00036215.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77120.15.00E-77alcohol dehydrogenase 1
NRAES72382.25.78E-129zinc-binding alcohol dehydrogenase family protein [Medicago truncatula]
COGYP_008046593.15.00E-75alcohol dehydrogenase GroES-like protein [Spiribacter salinus M19-40]
Swissprottr|P12886|ADH1_PEA2.00E-130Alcohol dehydrogenase 1
trEMBLtr|G7J5M8|G7J5M8_MEDTR2.00E-129Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:AES72382.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0345611135-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18857ADH1 EC:1.1.1.1 Glycolysis / Gluconeogenesis map00010
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Tyrosine metabolismmap00350


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003456s00036215.1PF08240.7ADH_N1899.50E-12
Glyur003456s00036215.1PF00107.21ADH_zinc_N1321939.90E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control132.794
SRR1783600control133.841
SRR1783602moderate drought stress62.829
SRR1811619moderate drought stress61.017

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain140.225
DRR006520Root Summer glycyrrhizin high producing strain142.575
DRR006521Root Winter glycyrrhizin high producing strain1896.452
DRR006522Root Winter glycyrrhizin high producing strain1834.511
DRR006523Root Summer glycyrrhizin low producing strain180.535
DRR006524Root Summer glycyrrhizin low producing strain184.379
DRR006525Leaf Summer glycyrrhizin high producing strain16.605
DRR006526Leaf Summer glycyrrhizin high producing strain13.541

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)37.165
SRR2868004Drought Stress(Tissue:root)30.715
SRR2967015Control (Tissue:root)34.786

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.387
SRR9715740Leave4.809
SRR9715741Leave11.353
SRR9715739Root86.896
SRR9715742Root104.272
SRR9715743Root99.617

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h283.448
SRR8749028MeJA induced 9h579.442
SRR8749029MeJA induced 9h804.107
SRR8749030Uninduced396.725
SRR8749031Uninduced507.824
SRR8749032Uninduced1137.588

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root164.863
SRR8400027Control-Root170.791

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved