Gene detail information of Glyur003483s00042652.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38400.21.00E-18alanine:glyoxylate aminotransferase 3
NRXP_003548722.12.26E-35PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial-like [Glycine max]
COGYP_005446575.13.00E-17aminotransferase [Phycisphaera mikurensis NBRC 102666]
Swissprottr|Q94AL9|AGT22_ARATH9.00E-34Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial (Precursor)
trEMBLtr|K7MGE8|K7MGE8_SOYBN9.00E-36Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G17820.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0348336802+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00827AGXT2 EC:2.6.1.44 2.6.1.40 Alanine, aspartate and glutamate metabolism map00250
Glycine, serine and threonine metabolismmap00260
Cysteine and methionine metabolismmap00270
Valine, leucine and isoleucine degradationmap00280


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0008483  transaminase activity

GO:0030170  pyridoxal phosphate binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
----------


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.246
SRR1783600control3.990
SRR1783602moderate drought stress2.970
SRR1811619moderate drought stress2.415

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.735
DRR006520Root Summer glycyrrhizin high producing strain4.808
DRR006521Root Winter glycyrrhizin high producing strain3.542
DRR006522Root Winter glycyrrhizin high producing strain3.648
DRR006523Root Summer glycyrrhizin low producing strain3.882
DRR006524Root Summer glycyrrhizin low producing strain3.591
DRR006525Leaf Summer glycyrrhizin high producing strain1.465
DRR006526Leaf Summer glycyrrhizin high producing strain1.668

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.010
SRR2868004Drought Stress(Tissue:root)7.271
SRR2967015Control (Tissue:root)7.063

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.169
SRR9715740Leave0.051
SRR9715741Leave0.096
SRR9715739Root0.000
SRR9715742Root0.027
SRR9715743Root0.329

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.047
SRR8749028MeJA induced 9h9.535
SRR8749029MeJA induced 9h3.116
SRR8749030Uninduced5.734
SRR8749031Uninduced1.541
SRR8749032Uninduced3.076

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.524
SRR8400027Control-Root1.173