Gene detail information of Glyur003501s00042868.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14920.1 | 2.00E-131 | GRAS family transcription factor family protein |
| NR | XP_004507626.1 | 0 | PREDICTED: DELLA protein RHT-1-like [Cicer arietinum] |
| Swissprot | tr|Q9LQT8|GAI_ARATH | 9.00E-164 | DELLA protein GAI |
| trEMBL | tr|I1JW83|I1JW83_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G21340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03501 | 15790 | 17289 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003501s00042868.1 | PF12041.3 | DELLA | 21 | 89 | 6.60E-26 |
| Glyur003501s00042868.1 | PF03514.9 | GRAS | 128 | 496 | 1.10E-125 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.133 |
| SRR1783600 | control | 11.099 |
| SRR1783602 | moderate drought stress | 6.269 |
| SRR1811619 | moderate drought stress | 6.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.529 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.654 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.405 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.218 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.207 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 17.713 |
| SRR2868004 | Drought Stress(Tissue:root) | 11.849 |
| SRR2967015 | Control (Tissue:root) | 8.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.982 |
| SRR9715740 | Leave | 1.407 |
| SRR9715741 | Leave | 2.768 |
| SRR9715739 | Root | 134.313 |
| SRR9715742 | Root | 49.782 |
| SRR9715743 | Root | 64.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.296 |
| SRR8749028 | MeJA induced 9h | 0.567 |
| SRR8749029 | MeJA induced 9h | 1.096 |
| SRR8749030 | Uninduced | 0.268 |
| SRR8749031 | Uninduced | 0.007 |
| SRR8749032 | Uninduced | 0.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.575 |
| SRR8400027 | Control-Root | 25.508 |