Gene detail information of Glyur003507s00043528.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36190.1 | 7.00E-158 | cell wall invertase 4 |
| NR | XP_004515216.1 | 0 | PREDICTED: beta-fructofuranosidase, insoluble isoenzyme 1-like [Cicer arietinum] |
| COG | YP_004640399.1 | 3.00E-29 | sucrose-6-phosphate hydrolase [Paenibacillus mucilaginosus KNP414] |
| Swissprot | tr|P26792|INV1_DAUCA | 0 | Beta-fructofuranosidase, insoluble isoenzyme 1 (Precursor) |
| trEMBL | tr|A0A072VKQ2|A0A072VKQ2_MEDTR | 0 | Beta-fructofuranosidase {ECO:0000313|EMBL:KEH42003.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03507 | 15802 | 22206 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH32 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01193 | INV, sacA | EC:3.2.1.26 | Galactose metabolism | map00052 |
| Starch and sucrose metabolism | map00500 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003507s00043528.1 | PF00251.15 | Glyco_hydro_32N | 60 | 333 | 8.40E-85 |
| Glyur003507s00043528.1 | PF08244.7 | Glyco_hydro_32C | 369 | 433 | 1.00E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.460 |
| SRR1783600 | control | 1.714 |
| SRR1783602 | moderate drought stress | 1.780 |
| SRR1811619 | moderate drought stress | 2.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.324 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.354 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.077 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.227 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.580 |
| SRR2967015 | Control (Tissue:root) | 1.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.103 |
| SRR9715740 | Leave | 0.074 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.657 |
| SRR9715743 | Root | 0.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.876 |
| SRR8400027 | Control-Root | 2.904 |