Gene detail information of Glyur003531s00039537.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33330.12.00E-136plant glycogenin-like starch initiation protein 3
NRXP_004499061.10PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like isoform X1 [Cicer arietinum]
COGYP_004303520.11.00E-13glycosyltransferase (sulfolipid biosynthesis) protein [Polymorphum gilvum SL003B-26A1]
Swissprottr|Q8GWW4|GUX2_ARATH0UDP-glucuronate:xylan alpha-glucuronosyltransferase 2
trEMBLtr|I1M8L8|I1M8L8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G09070.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold035311314419089-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0009834  plant-type secondary cell wall biogenesis

GO:0045492  xylan biosynthetic process


cellular_component

GO:0005794  Golgi apparatus


molecular_function

GO:0015020  glucuronosyltransferase activity

GO:0016757  transferase activity, transferring glycosyl groups

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003531s00039537.1PF01501.15Glyco_transf_83184241.30E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.238
SRR1783600control9.273
SRR1783602moderate drought stress6.572
SRR1811619moderate drought stress6.288

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.220
DRR006520Root Summer glycyrrhizin high producing strain6.276
DRR006521Root Winter glycyrrhizin high producing strain0.051
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain3.528
DRR006524Root Summer glycyrrhizin low producing strain3.578
DRR006525Leaf Summer glycyrrhizin high producing strain3.477
DRR006526Leaf Summer glycyrrhizin high producing strain3.510

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.521
SRR2868004Drought Stress(Tissue:root)40.620
SRR2967015Control (Tissue:root)35.352

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.484
SRR9715740Leave3.578
SRR9715741Leave0.741
SRR9715739Root15.585
SRR9715742Root16.138
SRR9715743Root14.727

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.152
SRR8749028MeJA induced 9h0.061
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.232
SRR8749031Uninduced0.152
SRR8749032Uninduced0.063

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root46.471
SRR8400027Control-Root46.204

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved