Gene detail information of Glyur003541s00037730.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14060.20Aspartate kinase family protein
NRXP_006574470.10PREDICTED: precursor monofunctional aspartokinase isoform X1 [Glycine max]
COGYP_001996257.12.00E-89aspartate kinase III [Chloroherpeton thalassium ATCC 35110]
Swissprottr|O23653|AK2_ARATH0Aspartokinase 2, chloroplastic (Precursor)
trEMBLtr|Q9XHC5|Q9XHC5_SOYBN0Aspartokinase {ECO:0000256|RuleBase:RU003448}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold03541996516634+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00928lysC EC:2.7.2.4 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Glycine, serine and threonine metabolismmap00260
Cysteine and methionine metabolismmap00270
Lysine biosynthesismap00300
Monobactam biosynthesismap00261


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016597  amino acid binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003541s00037730.3PF01842.20ACT28958.20E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.145
SRR1783600control21.991
SRR1783602moderate drought stress6.976
SRR1811619moderate drought stress6.964

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.237
DRR006520Root Summer glycyrrhizin high producing strain21.160
DRR006521Root Winter glycyrrhizin high producing strain21.443
DRR006522Root Winter glycyrrhizin high producing strain20.385
DRR006523Root Summer glycyrrhizin low producing strain28.899
DRR006524Root Summer glycyrrhizin low producing strain30.140
DRR006525Leaf Summer glycyrrhizin high producing strain10.877
DRR006526Leaf Summer glycyrrhizin high producing strain10.520

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)79.027
SRR2868004Drought Stress(Tissue:root)40.166
SRR2967015Control (Tissue:root)33.390

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.713
SRR9715740Leave26.379
SRR9715741Leave30.408
SRR9715739Root21.930
SRR9715742Root56.593
SRR9715743Root49.966

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h64.471
SRR8749028MeJA induced 9h256.655
SRR8749029MeJA induced 9h200.774
SRR8749030Uninduced175.167
SRR8749031Uninduced200.208
SRR8749032Uninduced240.609

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.423
SRR8400027Control-Root41.957

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved