Gene detail information of Glyur003555s00041823.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19650.1 | 1.00E-14 | ovate family protein 8 |
| NR | XP_004501129.1 | 9.18E-97 | PREDICTED: uncharacterized protein LOC101512953 [Cicer arietinum] |
| Swissprot | tr|Q3E9B4|OFP8_ARATH | 4.00E-23 | Transcription repressor OFP8 |
| trEMBL | tr|V7ASE1|V7ASE1_PHAVU | 5.00E-91 | Uncharacterized protein {ECO:0000313|EMBL:ESW08577.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03555 | 5596 | 6423 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003555s00041823.1 | PF04844.8 | Ovate | 193 | 250 | 6.10E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.044 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.267 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.175 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.083 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.263 |
| SRR2967015 | Control (Tissue:root) | 0.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.456 |
| SRR9715740 | Leave | 0.364 |
| SRR9715741 | Leave | 0.392 |
| SRR9715739 | Root | 0.180 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.092 |
| SRR8749028 | MeJA induced 9h | 0.596 |
| SRR8749029 | MeJA induced 9h | 0.487 |
| SRR8749030 | Uninduced | 0.072 |
| SRR8749031 | Uninduced | 0.185 |
| SRR8749032 | Uninduced | 0.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.271 |
| SRR8400027 | Control-Root | 0.258 |