Gene detail information of Glyur003560s00045085.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22930.1 | 1.00E-100 | UDP-Glycosyltransferase superfamily protein |
| NR | KHN36711.1 | 0 | UDP-glycosyltransferase 79B6 [Glycine soja] |
| Swissprot | tr|Q53UH4|DUSKY_IPONI | 2.00E-174 | Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase |
| trEMBL | tr|C6TMQ0|C6TMQ0_SOYBN | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU24192.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03560 | 4031 | 5811 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003560s00045085.1 | PF00201.13 | UDPGT | 327 | 415 | 4.80E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.802 |
| SRR1783600 | control | 6.895 |
| SRR1783602 | moderate drought stress | 8.175 |
| SRR1811619 | moderate drought stress | 7.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.805 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.741 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.087 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.140 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.292 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.250 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.440 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.723 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.982 |
| SRR2967015 | Control (Tissue:root) | 12.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.599 |
| SRR9715740 | Leave | 1.958 |
| SRR9715741 | Leave | 1.999 |
| SRR9715739 | Root | 1.447 |
| SRR9715742 | Root | 4.426 |
| SRR9715743 | Root | 3.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.629 |
| SRR8749028 | MeJA induced 9h | 0.144 |
| SRR8749029 | MeJA induced 9h | 0.295 |
| SRR8749030 | Uninduced | 0.221 |
| SRR8749031 | Uninduced | 0.175 |
| SRR8749032 | Uninduced | 0.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.530 |
| SRR8400027 | Control-Root | 11.123 |