Gene detail information of Glyur003562s00044258.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42650.11.00E-139allene oxide synthase
NRBAJ78218.109/13-hydroperoxide lyase [Lotus japonicus]
COGYP_002501570.12.00E-19heme peroxidase [Methylobacterium nodulans ORS 2060]
Swissprottr|P48417|CP74_LINUS2.00E-176Allene oxide synthase, chloroplastic (Precursor)
trEMBLtr|E9RHS6|E9RHS6_LOTJA09/13-hydroperoxide lyase {ECO:0000313|EMBL:BAJ78218.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold035621185014035-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP74A


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01723AOS EC:4.2.1.92 alpha-Linolenic acid metabolism map00592


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004497  monooxygenase activity

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003562s00044258.1PF00067.17p4503164633.90E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.142
SRR1783600control27.155
SRR1783602moderate drought stress37.437
SRR1811619moderate drought stress37.766

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.573
DRR006520Root Summer glycyrrhizin high producing strain8.407
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.425
DRR006524Root Summer glycyrrhizin low producing strain1.561
DRR006525Leaf Summer glycyrrhizin high producing strain0.682
DRR006526Leaf Summer glycyrrhizin high producing strain0.666

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)118.974
SRR2868004Drought Stress(Tissue:root)175.605
SRR2967015Control (Tissue:root)130.138

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave41.783
SRR9715740Leave11.904
SRR9715741Leave77.094
SRR9715739Root83.788
SRR9715742Root131.169
SRR9715743Root112.832

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.637
SRR8749028MeJA induced 9h17.329
SRR8749029MeJA induced 9h5.883
SRR8749030Uninduced40.374
SRR8749031Uninduced47.250
SRR8749032Uninduced73.466

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root108.350
SRR8400027Control-Root60.863

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved