Gene detail information of Glyur003590s00046887.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10360.1 | 1.00E-17 | glutathione S-transferase TAU 18 |
| NR | XP_007153865.1 | 8.13E-25 | hypothetical protein PHAVU_003G071300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FUS9|GSTUI_ARATH | 3.00E-21 | Glutathione S-transferase U18 |
| trEMBL | tr|I1N1A6|I1N1A6_SOYBN | 3.00E-26 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G16850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03590 | 5888 | 6389 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003590s00046887.1 | PF13410.1 | GST_C_2 | 3 | 70 | 1.10E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.999 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.561 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.221 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.159 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.764 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.886 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.800 |
| SRR2967015 | Control (Tissue:root) | 0.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 81.136 |
| SRR9715740 | Leave | 0.131 |
| SRR9715741 | Leave | 20.876 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.162 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.369 |
| SRR8749031 | Uninduced | 0.292 |
| SRR8749032 | Uninduced | 0.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.114 |
| SRR8400027 | Control-Root | 0.438 |