Gene detail information of Glyur003630s00039680.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G16740.29.00E-42terpene synthase 03
NRACJ85620.12.83E-115unknown [Medicago truncatula]
Swissprottr|Q672F7|TPS2_LOTJA7.00E-117Tricyclene synthase EBOS, chloroplastic (Precursor)
trEMBLtr|A0A072UIS6|A0A072UIS6_MEDTR7.00E-115(E)-beta-ocimene/myrcene synthase {ECO:0000313|EMBL:KEH29582.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0363059848769+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12742ispS EC:4.2.3.27 Terpenoid backbone biosynthesis map00900


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0010333  terpene synthase activity

GO:0016829  lyase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003630s00039680.1PF01397.16Terpene_synth261979.50E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.189
SRR1783600control0.113
SRR1783602moderate drought stress4.549
SRR1811619moderate drought stress4.491

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.334
DRR006520Root Summer glycyrrhizin high producing strain0.241
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.424
DRR006524Root Summer glycyrrhizin low producing strain0.288
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.055
SRR2868004Drought Stress(Tissue:root)0.226
SRR2967015Control (Tissue:root)0.750

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.977
SRR9715740Leave0.191
SRR9715741Leave3.359
SRR9715739Root0.065
SRR9715742Root5.353
SRR9715743Root4.740

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.665
SRR8749028MeJA induced 9h10.659
SRR8749029MeJA induced 9h6.235
SRR8749030Uninduced39.824
SRR8749031Uninduced75.022
SRR8749032Uninduced34.463

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.635
SRR8400027Control-Root1.518

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved