Gene detail information of Glyur003680s00047799.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G21910.17.00E-27Integrase-type DNA-binding superfamily protein
NRNP_001239623.11.97E-79ethylene-responsive transcription factor ERF012-like [Glycine max]
Swissprottr|Q9SFE4|ERF12_ARATH2.00E-46Ethylene-responsive transcription factor ERF012
trEMBLtr|C9WA62|C9WA62_SOYBN7.00E-80Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G22970.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold036801089411634-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003680s00047799.1PF00847.15AP234847.80E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.760
SRR1783600control5.382
SRR1783602moderate drought stress4.636
SRR1811619moderate drought stress4.561

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain95.055
DRR006520Root Summer glycyrrhizin high producing strain92.678
DRR006521Root Winter glycyrrhizin high producing strain0.301
DRR006522Root Winter glycyrrhizin high producing strain0.622
DRR006523Root Summer glycyrrhizin low producing strain166.525
DRR006524Root Summer glycyrrhizin low producing strain157.745
DRR006525Leaf Summer glycyrrhizin high producing strain1.227
DRR006526Leaf Summer glycyrrhizin high producing strain1.058

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.311
SRR2868004Drought Stress(Tissue:root)11.180
SRR2967015Control (Tissue:root)14.088

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.696
SRR9715740Leave7.495
SRR9715741Leave4.314
SRR9715739Root57.547
SRR9715742Root28.166
SRR9715743Root32.773

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h140.974
SRR8749028MeJA induced 9h35.347
SRR8749029MeJA induced 9h67.569
SRR8749030Uninduced67.834
SRR8749031Uninduced3.714
SRR8749032Uninduced8.587

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.474
SRR8400027Control-Root13.777

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved