Gene detail information of Glyur003698s00040368.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48740.10Leucine-rich repeat protein kinase family protein
NRAES79129.20LRR receptor-like kinase [Medicago truncatula]
COGYP_525172.12.00E-11serine/threonine protein kinase with Chase2 sensor [Albidiferax ferrireducens T118]
Swissprottr|C0LGV0|Y5487_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At5g48740 (Precursor)
trEMBLtr|G7L173|G7L173_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES79129.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold036985128670-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.8.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003698s00040368.1PF12819.2Malectin_like113121.70E-48
Glyur003698s00040368.1PF00560.28LRR_13623830.064
Glyur003698s00040368.1PF00560.28LRR_13854041.2
Glyur003698s00040368.1PF07714.12Pkinase_Tyr5176248.60E-17
Glyur003698s00040368.1PF00069.20Pkinase6306851.40E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.309
SRR1783600control0.359
SRR1783602moderate drought stress0.237
SRR1811619moderate drought stress0.257

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.929
DRR006520Root Summer glycyrrhizin high producing strain2.089
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.811
DRR006524Root Summer glycyrrhizin low producing strain0.745
DRR006525Leaf Summer glycyrrhizin high producing strain0.484
DRR006526Leaf Summer glycyrrhizin high producing strain0.663

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.416
SRR2868004Drought Stress(Tissue:root)1.806
SRR2967015Control (Tissue:root)2.680

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.204
SRR9715740Leave0.066
SRR9715741Leave0.199
SRR9715739Root0.041
SRR9715742Root0.470
SRR9715743Root0.601

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.021
SRR8749028MeJA induced 9h0.039
SRR8749029MeJA induced 9h0.041
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.021
SRR8400027Control-Root1.929

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved