Gene detail information of Glyur003703s00043725.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61850.1 | 9.00E-38 | Dof-type zinc finger DNA-binding family protein |
| NR | NP_001236777.1 | 1.46E-95 | Dof21 [Glycine max] |
| Swissprot | tr|Q43385|DOF37_ARATH | 6.00E-48 | Dof zinc finger protein DOF3.7 |
| trEMBL | tr|Q0GLD1|Q0GLD1_SOYBN | 5.00E-96 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G41170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03703 | 4896 | 7159 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2C2-Dof |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003703s00043725.1 | PF02701.10 | zf-Dof | 41 | 100 | 4.90E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.749 |
| SRR1783600 | control | 16.938 |
| SRR1783602 | moderate drought stress | 18.097 |
| SRR1811619 | moderate drought stress | 18.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.258 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.270 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 62.898 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 60.445 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.107 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.235 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.403 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.818 |
| SRR2868004 | Drought Stress(Tissue:root) | 18.223 |
| SRR2967015 | Control (Tissue:root) | 21.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.697 |
| SRR9715740 | Leave | 2.630 |
| SRR9715741 | Leave | 1.461 |
| SRR9715739 | Root | 1.797 |
| SRR9715742 | Root | 4.741 |
| SRR9715743 | Root | 4.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.050 |
| SRR8749028 | MeJA induced 9h | 5.893 |
| SRR8749029 | MeJA induced 9h | 20.329 |
| SRR8749030 | Uninduced | 3.303 |
| SRR8749031 | Uninduced | 1.049 |
| SRR8749032 | Uninduced | 4.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 25.328 |
| SRR8400027 | Control-Root | 20.410 |