Gene detail information of Glyur003717s00042100.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36250.1 | 7.00E-12 | aldehyde dehydrogenase 3F1 |
| NR | XP_007132013.1 | 9.91E-25 | hypothetical protein PHAVU_011G059400g [Phaseolus vulgaris] |
| COG | YP_156374.1 | 7.00E-10 | NAD-dependent aldehyde dehydrogenase [Idiomarina loihiensis L2TR] |
| Swissprot | tr|Q70E96|AL3F1_ARATH | 2.00E-12 | Aldehyde dehydrogenase family 3 member F1 |
| trEMBL | tr|V7AEJ5|V7AEJ5_PHAVU | 4.00E-25 | Uncharacterized protein {ECO:0000313|EMBL:ESW04007.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03717 | 15410 | 16027 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.334 |
| SRR1783600 | control | 3.338 |
| SRR1783602 | moderate drought stress | 3.395 |
| SRR1811619 | moderate drought stress | 2.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.946 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.220 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.484 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.977 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.778 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.726 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.071 |
| SRR2967015 | Control (Tissue:root) | 2.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.347 |
| SRR9715740 | Leave | 1.150 |
| SRR9715741 | Leave | 2.167 |
| SRR9715739 | Root | 1.440 |
| SRR9715742 | Root | 5.236 |
| SRR9715743 | Root | 5.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.126 |
| SRR8749028 | MeJA induced 9h | 7.328 |
| SRR8749029 | MeJA induced 9h | 14.904 |
| SRR8749030 | Uninduced | 5.654 |
| SRR8749031 | Uninduced | 9.157 |
| SRR8749032 | Uninduced | 8.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.679 |
| SRR8400027 | Control-Root | 6.056 |