Gene detail

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Gene detail information of Glyur003755s00040801.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G19630.1	2.00E-41	cytochrome P450, family 722, subfamily A, polypeptide 1
NR	KEH25831.1	0	cytochrome P450 family protein [Medicago truncatula]
COG	YP_007117231.1	6.00E-40	(+)-abscisic acid 8'-hydroxylase [Oscillatoria nigro-viridis PCC 7112]
Swissprot	tr\|Q9FH76\|ABAH3_ARATH	7.00E-55	Abscisic acid 8'-hydroxylase 3
trEMBL	tr\|A0A072U8X2\|A0A072U8X2_MEDTR	0	Cytochrome P450 family protein {ECO:0000313\|EMBL:KEH25831.1}

Sequence

Transcript Sequence

>Glyur003755s00040801.1
ATGGATCTGATCAATATGCTACTCTCATTGATCCTTTCCTTGATAATGCTATCAATTCTCTTGTTGATGTATCTGACTCGTTCCCCTAAAGAAATGGAAGGCATCCCTGGTAGCCTAGGTTGGCCAATTGTGGGTGAGAGTTTTTCATTCCTATATGGGAAGGTTTTCAAGAGCTTTGTGTTGGGGAGGTTCACCGTCTTCATGACTGGGAGAGAAGCAAGCAAGATATTGTTAACTGGGCAGGATGGGATTGTGAGTTTGAATTTGTTCTACACTGGCCAGCAAGTTCTGGGCCCCACCAGCTTGCTGCAAACCACTGGAGAAGCACACAAAAGGCTGAGAAGGCTGATTGGCGAACCTCTGTCAATGGATGGCCTTAAAAAGTATTTCCATTTTATCAATACTCAGGCAATGGCAACATTAGATCAATGGCAAGGAAGGAAAGTCATGGTTCTTGAAGAGGCTTCTACATTCACACTAAAAGTGATTGGACACATGATCATGAGCTTAGAGCCTACTGGGGAGGAACAAGAGAAGTTTAGGTCGAATTTCAAGATTATTTCTTCCTCATTTGCCTCATTGCCTTTTAAACTTCCAGGGACAGCTTTCCATCGCGGTATCAAGGCTCGGGATAGGATGTATGACATGTTGGACTCTATAATTTCTAGGAGGAGAAGTGGTCAAGACTTTCAACAGGATTTCTTAGAATCCCTAATCATGAAACATAGCAGGGAAGCAGATGGACCACATGATGAAAACAAACTCACTGACAAACAACTGAAGGACAATGTATTAACCCTGCTTGTTGCAGGCCATGATACCACAACTGCTGCTCTTACATGGCTCATCAAATTCCTTGAAGAGAATCCAAGTGTTCTAGAACAATTGAGAGCATCCCAAGATTTTGAAATTGATGGATATAAAATCAAGAAAGGTTGGTCCATCAACCTAGATGTTGTTTCCATACACCATGACCCGAAAGTTTTCCCAGATCCCAAGAAGTTTGATCCCTCTAGATTTGATGAACACTTAAGGCCTTTTAGCTTTCTTGGATTTGGTAGTGGACCACGTATGTGGAGACCTATAGAGAAAGATGATGCTGTCCAACCAACGCTTGTGAGGATGCCAAAGAACAAGTATCCTGTTATAGTTGAGTCACTATAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold03755	7788	12468	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP722A1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003755s00040801.1	PF00067.17	p450	52	298	9.40E-22
Glyur003755s00040801.1	PF00067.17	p450	298	357	6.90E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.225
SRR1783600	control	0.148
SRR1783602	moderate drought stress	0.049
SRR1811619	moderate drought stress	0.057

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.079
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.079

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.830
SRR2868004	Drought Stress(Tissue:root)	1.863
SRR2967015	Control (Tissue:root)	0.419

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.034
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.054
SRR8749031	Uninduced	0.064
SRR8749032	Uninduced	0.008

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.086
SRR8400027	Control-Root	0.083