Gene detail information of Glyur003764s00041078.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G34300.15.00E-83lectin protein kinase family protein
NRXP_003529974.20PREDICTED: putative receptor protein kinase ZmPK1-like [Glycine max]
COGYP_003797670.12.00E-23putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
Swissprottr|P17801|KPRO_MAIZE2.00E-177Putative receptor protein kinase ZmPK1 (Precursor)
trEMBLtr|I1KIJ6|I1KIJ6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G08780.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold037641225414641+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003764s00041078.1PF01453.19B_lectin651552.00E-19
Glyur003764s00041078.1PF00954.15S_locus_glycop2272907.70E-06
Glyur003764s00041078.1PF00069.20Pkinase4987581.50E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.002
SRR1783600control2.060
SRR1783602moderate drought stress1.073
SRR1811619moderate drought stress1.173

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.246
DRR006520Root Summer glycyrrhizin high producing strain21.111
DRR006521Root Winter glycyrrhizin high producing strain2.314
DRR006522Root Winter glycyrrhizin high producing strain2.467
DRR006523Root Summer glycyrrhizin low producing strain15.684
DRR006524Root Summer glycyrrhizin low producing strain15.138
DRR006525Leaf Summer glycyrrhizin high producing strain14.253
DRR006526Leaf Summer glycyrrhizin high producing strain14.328

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.540
SRR2868004Drought Stress(Tissue:root)6.719
SRR2967015Control (Tissue:root)12.635

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave58.417
SRR9715740Leave49.815
SRR9715741Leave62.839
SRR9715739Root3.943
SRR9715742Root18.896
SRR9715743Root15.658

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.099
SRR8749028MeJA induced 9h14.482
SRR8749029MeJA induced 9h10.270
SRR8749030Uninduced18.368
SRR8749031Uninduced29.680
SRR8749032Uninduced24.157

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.432
SRR8400027Control-Root7.091

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved