Gene detail information of Glyur003792s00046197.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77760.10nitrate reductase 1
NRP39869.10RecName: Full=Nitrate reductase [NADH]; Short=NR [Lotus japonicus]
COGYP_001545630.14.00E-36sulfite oxidase [Herpetosiphon aurantiacus DSM 785]
Swissprottr|P39869|NIA_LOTJA0Nitrate reductase [NADH]
trEMBLtr|I1LW34|I1LW34_SOYBN0Nitrate reductase {ECO:0000256|PIRNR:PIRNR000233}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold037921050515093-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10534NR EC:1.7.1.1 1.7.1.2 1.7.1.3 Nitrogen metabolism map00910


Gene Ontology

biological_process

GO:0042128  nitrate assimilation

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0020037  heme binding

GO:0030151  molybdenum ion binding

GO:0043546  molybdopterin cofactor binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003792s00046197.1PF00174.14Oxidored_molyb1213045.30E-53
Glyur003792s00046197.1PF03404.11Mo-co_dimer3303731.30E-06
Glyur003792s00046197.1PF00173.23Cyt-b54345051.80E-28
Glyur003792s00046197.1PF00970.19FAD_binding_65576644.30E-34
Glyur003792s00046197.1PF00175.16NAD_binding_16847912.50E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.749
SRR1783600control14.676
SRR1783602moderate drought stress109.867
SRR1811619moderate drought stress109.187

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.564
DRR006520Root Summer glycyrrhizin high producing strain34.413
DRR006521Root Winter glycyrrhizin high producing strain120.293
DRR006522Root Winter glycyrrhizin high producing strain116.617
DRR006523Root Summer glycyrrhizin low producing strain89.203
DRR006524Root Summer glycyrrhizin low producing strain89.695
DRR006525Leaf Summer glycyrrhizin high producing strain374.100
DRR006526Leaf Summer glycyrrhizin high producing strain367.627

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)48.895
SRR2868004Drought Stress(Tissue:root)38.867
SRR2967015Control (Tissue:root)38.007

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave134.630
SRR9715740Leave193.874
SRR9715741Leave89.939
SRR9715739Root46.515
SRR9715742Root28.820
SRR9715743Root29.880

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h416.172
SRR8749028MeJA induced 9h674.009
SRR8749029MeJA induced 9h625.010
SRR8749030Uninduced319.889
SRR8749031Uninduced411.510
SRR8749032Uninduced559.893

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.463
SRR8400027Control-Root51.731

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved