Gene detail information of Glyur003866s00038959.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65530.11.00E-137Protein kinase superfamily protein
NRKEH20107.10receptor-like cytosolic Serine/Threonine-kinase [Medicago truncatula]
COGYP_007779934.15.00E-23Serine/threonine protein kinase [Roseburia intestinalis XB6B4]
Swissprottr|Q8H1D6|RBK1_ARATH1.00E-164Receptor-like cytosolic serine/threonine-protein kinase RBK1
trEMBLtr|A0A072TRR5|A0A072TRR5_MEDTR0Receptor-like cytosolic Serine/Threonine-kinase {ECO:0000313|EMBL:KEH20107.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold038661521919264-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.10.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003866s00038959.2PF00069.20Pkinase1534312.00E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.284
SRR1783600control0.349
SRR1783602moderate drought stress0.176
SRR1811619moderate drought stress0.198

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.126
DRR006520Root Summer glycyrrhizin high producing strain1.047
DRR006521Root Winter glycyrrhizin high producing strain0.151
DRR006522Root Winter glycyrrhizin high producing strain0.127
DRR006523Root Summer glycyrrhizin low producing strain0.881
DRR006524Root Summer glycyrrhizin low producing strain0.949
DRR006525Leaf Summer glycyrrhizin high producing strain0.518
DRR006526Leaf Summer glycyrrhizin high producing strain0.517

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.466
SRR2868004Drought Stress(Tissue:root)1.914
SRR2967015Control (Tissue:root)2.011

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.577
SRR9715740Leave0.000
SRR9715741Leave0.458
SRR9715739Root0.318
SRR9715742Root0.697
SRR9715743Root0.600

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.029
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.088
SRR8749031Uninduced0.000
SRR8749032Uninduced0.039

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.668
SRR8400027Control-Root0.611

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved