Gene detail

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Gene detail information of Glyur003880s00044848.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G25390.1	7.00E-111	Protein kinase superfamily protein
NR	XP_004497065.1	0	PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum]
COG	YP_001958461.1	1.00E-27	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q3ECH2\|Y1670_ARATH	9.00E-120	Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBL	tr\|G7IC79\|G7IC79_MEDTR	0	Tyrosine kinase family protein {ECO:0000313\|EMBL:AES62866.1}

Sequence

Transcript Sequence

>Glyur003880s00044848.1
ATGTATGTACATGATGAGTTCCTTTTGTTTTCTCATCTAACTCTGCTGCTGCTACTGGTCGCAGGGAACGTAAATGCGCACCCTGATGATTGTCCAGACTCGTTCGATTGCGGAAGCCTTGGGACGATTGGCTACCCTTTCACCAAGACACAATTCTTGGAATGTGGTACATTGGCAATCCAGGGTTGTGATGATCTCAACAAAACTGCAGTGAAGCATGTCCAATTAACCAGTGGAGGAAAATTGTTTCGAGTTAGACAAGTTGATAGCCACTGGCCCTATAGTATTTCCGTTGTTGATGAAGATTTCAGCAAGCTAATTTTGCGGCATAATGCTTGTGAGGCCTTCGGGTATAATAATATTACCCTCCCTCCTCCCTCTCCTTCTGGACTTTTTTATATGAAAAACANCATAACCGCCTTCAAATGCAACCGCAGNCACATCCACATCCACAGCGTCGACCCTCCAAATAACTTCTTCAAAAACAGCACCTGTCCTCACTCTCTTTTTTACTTCGGCCCTCCAATACCTGATGATGATGATGAGTCCCTGCGCTCTTCAGCATCGTGTTCAGTGTCTCACCTTCCCGTGATCGAAGGTTTTGCATTATCCGGAAACCCATTTCCATTCTTAACTGATGAAATTACCATTCAATTACAATCTTCAGATTACTGTCNCCATTGTTACCGTGATANAAAAGGCCATTGTCGACTTAAAGGCAACGGAGAAGTTTATTGCGCCATAAGGAAGGGTAGAAGTTCGACTTGGAGGCTAGGATTGGCGTTAGGATGCTCAGTGGCTGGATTAATTATAGGGTTGATGATGGTCTTGGTTCGTTGCTTTAGTACAAAGACTTTTTTGACTTTTTTGAAGAAGGACCCAACTCATCGGATTATTGAGGAGTTTTTGAAGGAAGATGGAGCTCTTCCTGCAACTAGGTACAATTATTCAGATGTCAAGAAAGTTACCAACTCTTTTAGAAACAAATTAGGCCAAGGAGGATTTGGATGTGTATACAAAGGGAAGTTACATGATGGGCGTGTGGTTGCGGTGAAGGTTTTAAGTGAATCCAAAGGTAATGGAGAGGATTTCATTAATGAAGTTGCGAGTATTAGCCGGACTTCACATGTTAACATTGTTAGACTTTTGGGGTTCTGTTTGGATGGTTCTAAAAAGGCACTAATATACGAATTTATGCCTAATGGATCTCTTGAGAAGTTCATATATGAAGAGAAAGAGCCATTGCTGGATGAGCGCCAACTAGATTGTAGAACATTGTATGATATTGCAGTTGGCGTTGCCCGTGGATTAGAGTATTTGCATAGAGGCTGCAACACTAGAATCTTGCATTTTGACATAAAACCTCACAATATATTACTAGATGAGGATTTCTGTCCAAAAATTTCAGATTTTGGACTTGCTAAAATATGCCCAAGAAAAGAAAGTGTCGTATCCATATTTGGTGCGAGAGGAACCGTGGGATATATTGCTCCAGAGTTGTTCTCTAAAAATTTTGGTGGGGTGTCACATAAATCAGATGTCTACAGTTACGGAATGATGGTGTTAGAAATGGTCGGCCAAAGAAAGAATATTAAGGTTGAAGTTGATTGTTCTAGTGAGTTGTATTTTCCACACTGGATTTACAAGCGTCTTGAATTAAATCAGCTTGGACTCCGGTGTATCAAAAATGATATTGATGAAGAAATGGTAAGAAAAATGACGGTGGTGAGTTTATGGTGCATACAAACTGACCCTTCAAATCGACCAGCAATACACAAAGTGGTGGAAATGCTGGAAGGGAAACTTGAAGTGTTGGAAATACCGCCCAAACCCTTTCTGTCTTCTCCTTCAAGATCTTCTGCCCATTTGTCATCTGAAAGATCGAAGCGCCTGAGAAGTGAGAAAGACGAAGGCACGAAGGCGAGATTGTACGGATGTCTGGGAAGAAAATTGGCTGCAGCATTTTCCTATATGGAAAGTTTTGACCGTTCAAGAGAACTTGGAGAAGGAGGATTTGGGGCTGTATACTACGGAAAACTCAAAGATGGAAGGGAAGTTGCGGTGAAGCGCCTATTTGAGCACAATTACAGGAGACTGGAACAGTNCATGAACGAAATCAAGATCCTCACTCGATTGCNCCACAGAAACCTCGTGTCCCTCTANGGCTGCACCTCACGCCACAGCCGTGAGCTACTCCTTGTGTACGAATACATTCCGAACGGCACCGTTGCGAGCCATCTCCACGGCGATTTATCAAAGGCCGGTTTGCTGACGTGGCCCATCCGAATGCAAATTGCAATCGAGACCGCCACCGCACTGGCCTATCTCCACGCCTCCGAAATCATTCACCGCGATGTGAAAACCAACAACATCCTCCTCGACAACACGTTCTGTGTCAAGGTTGCGGATTTCGGACTGTCGAAACTGTTCCCAAACGATGGAACCCCTGGTTATGTGGACCCTGAATATCACCAATGCTACAGGCTCACAAACAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTGTTGAGCTGATATCGTCTATGCCTGCGGTTGACATGAACCGGCACAAGGATGTGATAAACTTGGCGAATCTAGCTATAAGGAGGATTCAGAAGTGTGCAATTGGGGAGCTGGTGGATCTTTCCCTTGGTTTTGAGGTGGATGGTGATGTTAGGAGGAAAATGGTTTTGATGGCGGAATTGGCTTTTCGGTGCTTGCAACAGGACAAGGAATTGAGGCCTTCGATGGATGAGGTCTTGGAGGTGCTGAGGAATATTAATAATTATGAGAGTAGCGGGAATATTAAGGATGTTGTTGAGGCGGGACATGATCTGTCACCGCCTTCACCAGACCATGATGAGGTGAAACTGTTGAAGAATATGAAGTTGACAACTTCTTCACCAAAGGTCATAACTACAGAGATAAGAGTATACACCGAGGCAACTGATGAAGCATATCTTCATGAGCCG

Protein Sequence

>Glyur003880s00044848.1
MYVHDEFLLFSHLTLLLLLVAGNVNAHPDDCPDSFDCGSLGTIGYPFTKTQFLECGTLAIQGCDDLNKTAVKHVQLTSGGKLFRVRQVDSHWPYSISVVDEDFSKLILRHNACEAFGYNNITLPPPSPSGLFYMKNXITAFKCNRXHIHIHSVDPPNNFFKNSTCPHSLFYFGPPIPDDDDESLRSSASCSVSHLPVIEGFALSGNPFPFLTDEITIQLQSSDYCXHCYRDXKGHCRLKGNGEVYCAIRKGRSSTWRLGLALGCSVAGLIIGLMMVLVRCFSTKTFLTFLKKDPTHRIIEEFLKEDGALPATRYNYSDVKKVTNSFRNKLGQGGFGCVYKGKLHDGRVVAVKVLSESKGNGEDFINEVASISRTSHVNIVRLLGFCLDGSKKALIYEFMPNGSLEKFIYEEKEPLLDERQLDCRTLYDIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICPRKESVVSIFGARGTVGYIAPELFSKNFGGVSHKSDVYSYGMMVLEMVGQRKNIKVEVDCSSELYFPHWIYKRLELNQLGLRCIKNDIDEEMVRKMTVVSLWCIQTDPSNRPAIHKVVEMLEGKLEVLEIPPKPFLSSPSRSSAHLSSERSKRLRSEKDEGTKARLYGCLGRKLAAAFSYMESFDRSRELGEGGFGAVYYGKLKDGREVAVKRLFEHNYRRLEQXMNEIKILTRLXHRNLVSLXGCTSRHSRELLLVYEYIPNGTVASHLHGDLSKAGLLTWPIRMQIAIETATALAYLHASEIIHRDVKTNNILLDNTFCVKVADFGLSKLFPNDGTPGYVDPEYHQCYRLTNKSDVYSFGVVLVELISSMPAVDMNRHKDVINLANLAIRRIQKCAIGELVDLSLGFEVDGDVRRKMVLMAELAFRCLQQDKELRPSMDEVLEVLRNINNYESSGNIKDVVEAGHDLSPPSPDHDEVKLLKNMKLTTSSPKVITTEIRVYTEATDEAYLHEP

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold03880	1428	16491	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003880s00044848.1	PF07714.12	Pkinase_Tyr	326	598	1.50E-44
Glyur003880s00044848.1	PF00069.20	Pkinase	663	922	2.50E-44

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.030
SRR1783602	moderate drought stress	0.006
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.055
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.037
DRR006522	Root Winter glycyrrhizin high producing strain	0.024
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.250
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.321

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.000
SRR2868004	Drought Stress(Tissue:root)	0.051
SRR2967015	Control (Tissue:root)	0.034

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	2.682
SRR9715740	Leave	3.379
SRR9715741	Leave	2.886
SRR9715739	Root	0.077
SRR9715742	Root	0.270
SRR9715743	Root	0.169

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.066
SRR8749028	MeJA induced 9h	0.297
SRR8749029	MeJA induced 9h	0.453
SRR8749030	Uninduced	0.442
SRR8749031	Uninduced	0.051
SRR8749032	Uninduced	0.019

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.019
SRR8400027	Control-Root	0.075