Gene detail information of Glyur003881s00043568.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48380.12.00E-82BAK1-interacting receptor-like kinase 1
NRAES90509.20LRR receptor-like kinase family protein, putative [Medicago truncatula]
COGYP_004579826.17.00E-08hypothetical protein [Lacinutrix sp. 5H-3-7-4]
Swissprottr|Q9ASS4|Y5838_ARATH1.00E-102Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (Precursor)
trEMBLtr|G7JSZ5|G7JSZ5_MEDTR0LRR receptor-like kinase family protein, putative {ECO:0000313|EMBL:AES90509.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold038811468516961-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003881s00043568.1PF08263.7LRRNT_230722.60E-05
Glyur003881s00043568.1PF07714.12Pkinase_Tyr3184462.40E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.010
SRR1783600control0.021
SRR1783602moderate drought stress0.007
SRR1811619moderate drought stress0.011

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.643
DRR006520Root Summer glycyrrhizin high producing strain0.589
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.096
DRR006524Root Summer glycyrrhizin low producing strain0.097
DRR006525Leaf Summer glycyrrhizin high producing strain1.371
DRR006526Leaf Summer glycyrrhizin high producing strain1.499

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.177
SRR2868004Drought Stress(Tissue:root)0.726
SRR2967015Control (Tissue:root)0.492

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.141
SRR9715740Leave2.770
SRR9715741Leave2.621
SRR9715739Root0.036
SRR9715742Root0.065
SRR9715743Root0.107

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.474
SRR8749028MeJA induced 9h1.149
SRR8749029MeJA induced 9h4.129
SRR8749030Uninduced0.378
SRR8749031Uninduced0.508
SRR8749032Uninduced0.333

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.206
SRR8400027Control-Root0.266

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved