Gene detail information of Glyur003888s00041507.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G15690.11.00E-93Inorganic H pyrophosphatase family protein
NRXP_003609464.13.18E-120Vacuolar proton-inorganic pyrophosphatase [Medicago truncatula]
COGYP_001840784.17.00E-39membrane-bound proton-translocating pyrophosphatase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Swissprottr|P21616|AVP_VIGRR4.00E-117Pyrophosphate-energized vacuolar membrane proton pump
trEMBLtr|B6DXD7|B6DXD7_MEDTR4.00E-120Vacuolar-type H-pyrophosphatase {ECO:0000313|EMBL:ACI22377.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0388836544917+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01507ppa EC:3.6.1.1 Oxidative phosphorylation map00190


Gene Ontology

biological_process

GO:0015992  proton transport


cellular_component

GO:0016020  membrane


molecular_function

GO:0004427  inorganic diphosphatase activity

GO:0009678  hydrogen-translocating pyrophosphatase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003888s00041507.1PF03030.11H_PPase192083.20E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.667
SRR1783600control9.571
SRR1783602moderate drought stress9.316
SRR1811619moderate drought stress9.605

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.023
DRR006520Root Summer glycyrrhizin high producing strain6.610
DRR006521Root Winter glycyrrhizin high producing strain4.896
DRR006522Root Winter glycyrrhizin high producing strain4.960
DRR006523Root Summer glycyrrhizin low producing strain9.092
DRR006524Root Summer glycyrrhizin low producing strain7.748
DRR006525Leaf Summer glycyrrhizin high producing strain3.144
DRR006526Leaf Summer glycyrrhizin high producing strain3.713

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.191
SRR2868004Drought Stress(Tissue:root)10.405
SRR2967015Control (Tissue:root)12.527

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.060
SRR9715740Leave5.278
SRR9715741Leave4.369
SRR9715739Root19.574
SRR9715742Root13.568
SRR9715743Root16.128

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.544
SRR8749028MeJA induced 9h1.434
SRR8749029MeJA induced 9h0.398
SRR8749030Uninduced0.469
SRR8749031Uninduced0.134
SRR8749032Uninduced0.311

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.219
SRR8400027Control-Root14.150

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved