Gene detail information of Glyur003933s00041102.2


Functional Annotation

DatabaseOrthologsE valueAnnotation

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold039334996712-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01110PTEN EC:3.1.3.16 3.1.3.48 3.1.3.67 Inositol phosphate metabolism map00562
FoxO signaling pathwaymap04068
Phosphatidylinositol signaling systemmap04070
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
p53 signaling pathwaymap04115
Focal adhesionmap04510
Longevity regulating pathway - wormmap04212
Pathways in cancermap05200
Central carbon metabolism in cancermap05230
MicroRNAs in cancermap05206
Gliomamap05214
Melanomamap05218
Prostate cancermap05215
Endometrial cancermap05213
Breast cancermap05224
Small cell lung cancermap05222
Insulin resistancemap04931
Hepatitis Bmap05161
EGFR tyrosine kinase inhibitor resistancemap01521


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.422
SRR1783600control3.212
SRR1783602moderate drought stress9.512
SRR1811619moderate drought stress7.587

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.856
DRR006520Root Summer glycyrrhizin high producing strain3.915
DRR006521Root Winter glycyrrhizin high producing strain12.184
DRR006522Root Winter glycyrrhizin high producing strain11.563
DRR006523Root Summer glycyrrhizin low producing strain0.341
DRR006524Root Summer glycyrrhizin low producing strain0.289
DRR006525Leaf Summer glycyrrhizin high producing strain0.383
DRR006526Leaf Summer glycyrrhizin high producing strain0.573

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.000
SRR2868004Drought Stress(Tissue:root)0.000
SRR2967015Control (Tissue:root)0.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.303
SRR9715740Leave3.886
SRR9715741Leave2.228
SRR9715739Root2.205
SRR9715742Root1.444
SRR9715743Root2.433

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.789
SRR8400027Control-Root4.578