Gene detail information of Glyur003936s00041362.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G52990.10Pyruvate kinase family protein
NRKHN24382.10Pyruvate kinase, cytosolic isozyme [Glycine soja]
COGYP_003305772.15.00E-89pyruvate kinase [Streptobacillus moniliformis DSM 12112]
Swissprottr|Q42806|KPYC_SOYBN2.00E-116Pyruvate kinase, cytosolic isozyme
trEMBLtr|V7BKD4|V7BKD4_PHAVU0Pyruvate kinase {ECO:0000256|RuleBase:RU000504} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold03936235813864-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00873PK, pyk EC:2.7.1.40 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922
Central carbon metabolism in cancermap05230
Viral carcinogenesismap05203
Type II diabetes mellitusmap04930


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0000287  magnesium ion binding

GO:0003824  catalytic activity

GO:0004743  pyruvate kinase activity

GO:0030955  potassium ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003936s00041362.1PF00224.16PK303752.00E-93
Glyur003936s00041362.1PF02887.11PK_C3954472.20E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control45.645
SRR1783600control45.372
SRR1783602moderate drought stress32.749
SRR1811619moderate drought stress32.920

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain39.278
DRR006520Root Summer glycyrrhizin high producing strain38.569
DRR006521Root Winter glycyrrhizin high producing strain14.093
DRR006522Root Winter glycyrrhizin high producing strain13.866
DRR006523Root Summer glycyrrhizin low producing strain33.356
DRR006524Root Summer glycyrrhizin low producing strain33.116
DRR006525Leaf Summer glycyrrhizin high producing strain21.388
DRR006526Leaf Summer glycyrrhizin high producing strain21.218

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.767
SRR2868004Drought Stress(Tissue:root)38.013
SRR2967015Control (Tissue:root)35.428

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.186
SRR9715740Leave10.225
SRR9715741Leave19.329
SRR9715739Root20.342
SRR9715742Root37.516
SRR9715743Root33.773

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h36.247
SRR8749028MeJA induced 9h60.729
SRR8749029MeJA induced 9h35.761
SRR8749030Uninduced16.405
SRR8749031Uninduced10.819
SRR8749032Uninduced12.219

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root44.564
SRR8400027Control-Root46.141

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved