Gene detail information of Glyur003990s00042128.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55550.10Concanavalin A-like lectin protein kinase family protein
NRXP_003537463.20PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max]
COGYP_004571825.12.00E-24serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|Q9M2S4|LRKS4_ARATH0L-type lectin-domain containing receptor kinase S.4 (Precursor)
trEMBLtr|I1LMH1|I1LMH1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G34210.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold039901212317908+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003990s00042128.1PF00139.14Lectin_legB272712.70E-77
Glyur003990s00042128.1PF00069.20Pkinase3555581.60E-49
Glyur003990s00042128.1PF00314.12Thaumatin6959161.40E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.819
SRR1783600control0.783
SRR1783602moderate drought stress1.257
SRR1811619moderate drought stress1.207

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.663
DRR006520Root Summer glycyrrhizin high producing strain3.789
DRR006521Root Winter glycyrrhizin high producing strain1.408
DRR006522Root Winter glycyrrhizin high producing strain1.280
DRR006523Root Summer glycyrrhizin low producing strain3.534
DRR006524Root Summer glycyrrhizin low producing strain3.335
DRR006525Leaf Summer glycyrrhizin high producing strain1.637
DRR006526Leaf Summer glycyrrhizin high producing strain1.584

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.326
SRR2868004Drought Stress(Tissue:root)11.204
SRR2967015Control (Tissue:root)8.129

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.716
SRR9715740Leave3.985
SRR9715741Leave8.600
SRR9715739Root1.374
SRR9715742Root12.785
SRR9715743Root9.639

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.437
SRR8749028MeJA induced 9h2.698
SRR8749029MeJA induced 9h0.356
SRR8749030Uninduced4.232
SRR8749031Uninduced0.502
SRR8749032Uninduced1.241

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.138
SRR8400027Control-Root5.865

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved