Gene detail information of Glyur004056s00040759.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G60850.11.00E-36OBF binding protein 4
NRXP_004508651.12.26E-122PREDICTED: dof zinc finger protein DOF5.4-like [Cicer arietinum]
Swissprottr|Q8LDR0|DOF54_ARATH7.00E-56Dof zinc finger protein DOF5.4
trEMBLtr|V7CE95|V7CE95_PHAVU4.00E-110Uncharacterized protein {ECO:0000313|EMBL:ESW27196.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0405617662719+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004056s00040759.1PF02701.10zf-Dof37972.20E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.632
SRR1783600control20.820
SRR1783602moderate drought stress33.893
SRR1811619moderate drought stress33.929

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.243
DRR006520Root Summer glycyrrhizin high producing strain19.123
DRR006521Root Winter glycyrrhizin high producing strain21.721
DRR006522Root Winter glycyrrhizin high producing strain20.645
DRR006523Root Summer glycyrrhizin low producing strain14.326
DRR006524Root Summer glycyrrhizin low producing strain14.183
DRR006525Leaf Summer glycyrrhizin high producing strain16.076
DRR006526Leaf Summer glycyrrhizin high producing strain16.812

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.791
SRR2868004Drought Stress(Tissue:root)10.809
SRR2967015Control (Tissue:root)10.031

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.369
SRR9715740Leave13.366
SRR9715741Leave12.001
SRR9715739Root36.573
SRR9715742Root51.247
SRR9715743Root43.402

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.956
SRR8749028MeJA induced 9h0.376
SRR8749029MeJA induced 9h0.789
SRR8749030Uninduced0.097
SRR8749031Uninduced0.037
SRR8749032Uninduced0.137

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.840
SRR8400027Control-Root17.674

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved