Gene detail information of Glyur004162s00044059.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G20950.23.00E-85Glycosyl hydrolase family protein
NRXP_003638320.16.32E-147Beta-D-glucosidase [Medicago truncatula]
COGYP_003265703.13.00E-57glycoside hydrolase [Haliangium ochraceum DSM 14365]
trEMBLtr|G8A1X0|G8A1X0_MEDTR2.00E-147Beta-D-glucosidase {ECO:0000313|EMBL:AES85458.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold041621454416959+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05349bglX EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004162s00044059.1PF00933.16Glyco_hydro_32529.10E-07
Glyur004162s00044059.1PF01915.17Glyco_hydro_3_C662532.40E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.213
SRR1783600control0.875
SRR1783602moderate drought stress2.221
SRR1811619moderate drought stress2.173

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.416
DRR006520Root Summer glycyrrhizin high producing strain5.119
DRR006521Root Winter glycyrrhizin high producing strain0.922
DRR006522Root Winter glycyrrhizin high producing strain0.699
DRR006523Root Summer glycyrrhizin low producing strain5.627
DRR006524Root Summer glycyrrhizin low producing strain6.073
DRR006525Leaf Summer glycyrrhizin high producing strain2.197
DRR006526Leaf Summer glycyrrhizin high producing strain1.802

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.735
SRR2868004Drought Stress(Tissue:root)2.668
SRR2967015Control (Tissue:root)3.407

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.010
SRR9715740Leave2.643
SRR9715741Leave1.237
SRR9715739Root0.735
SRR9715742Root1.306
SRR9715743Root1.220

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.981
SRR8749028MeJA induced 9h1.106
SRR8749029MeJA induced 9h1.126
SRR8749030Uninduced1.164
SRR8749031Uninduced0.581
SRR8749032Uninduced0.526

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.494
SRR8400027Control-Root4.437

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved