Gene detail information of Glyur004199s00038361.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24503.15.00E-106aldehyde dehydrogenase 2C4
NRXP_003629648.10Aldehyde dehydrogenase [Medicago truncatula]
COGYP_007058635.18.00E-114NAD-dependent aldehyde dehydrogenase [Rivularia sp. PCC 7116]
Swissprottr|Q56YU0|AL2C4_ARATH1.00E-147Aldehyde dehydrogenase family 2 member C4
trEMBLtr|G7L8Y6|G7L8Y6_MEDTR0Cytosolic aldehyde dehydrogenase RF2C {ECO:0000313|EMBL:AET04124.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold041991465116557-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12355REF1 EC:1.2.1.68 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004199s00038361.1PF00171.17Aldedh93068.70E-112


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.061
SRR1783600control10.589
SRR1783602moderate drought stress20.345
SRR1811619moderate drought stress20.500

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.120
DRR006520Root Summer glycyrrhizin high producing strain6.555
DRR006521Root Winter glycyrrhizin high producing strain0.089
DRR006522Root Winter glycyrrhizin high producing strain0.091
DRR006523Root Summer glycyrrhizin low producing strain4.537
DRR006524Root Summer glycyrrhizin low producing strain4.996
DRR006525Leaf Summer glycyrrhizin high producing strain1.009
DRR006526Leaf Summer glycyrrhizin high producing strain1.126

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)63.255
SRR2868004Drought Stress(Tissue:root)77.490
SRR2967015Control (Tissue:root)69.488

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.471
SRR9715740Leave1.360
SRR9715741Leave0.794
SRR9715739Root27.623
SRR9715742Root40.823
SRR9715743Root41.546

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.684
SRR8749028MeJA induced 9h1.769
SRR8749029MeJA induced 9h3.573
SRR8749030Uninduced0.373
SRR8749031Uninduced2.030
SRR8749032Uninduced2.043

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root100.623
SRR8400027Control-Root69.225

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved