Gene detail information of Glyur004243s00042067.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09270.1 | 6.00E-35 | glutathione S-transferase TAU 8 |
| NR | ACJ86006.1 | 4.57E-105 | unknown [Medicago truncatula] |
| Swissprot | tr|P32110|GSTX6_SOYBN | 2.00E-71 | Probable glutathione S-transferase |
| trEMBL | tr|B7FMM3|B7FMM3_MEDTR | 2.00E-105 | Uncharacterized protein {ECO:0000313|EMBL:AFK37765.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04243 | 2591 | 4484 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004243s00042067.1 | PF13417.1 | GST_N_3 | 10 | 71 | 1.90E-12 |
| Glyur004243s00042067.1 | PF00043.20 | GST_C | 76 | 161 | 1.50E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.039 |
| SRR1783600 | control | 0.035 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.464 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.564 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.170 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.039 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.056 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 49.516 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 48.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 47.546 |
| SRR2868004 | Drought Stress(Tissue:root) | 44.086 |
| SRR2967015 | Control (Tissue:root) | 29.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 59.486 |
| SRR9715740 | Leave | 99.864 |
| SRR9715741 | Leave | 51.701 |
| SRR9715739 | Root | 0.278 |
| SRR9715742 | Root | 1.376 |
| SRR9715743 | Root | 1.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.161 |
| SRR8749028 | MeJA induced 9h | 0.930 |
| SRR8749029 | MeJA induced 9h | 1.092 |
| SRR8749030 | Uninduced | 0.382 |
| SRR8749031 | Uninduced | 0.035 |
| SRR8749032 | Uninduced | 0.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.869 |
| SRR8400027 | Control-Root | 2.083 |